sci-biology/cytoscape-bin: add 3.10.4

Signed-off-by: Andres Becerra <andres.becerra@gmail.com>

sci-biology/cytoscape-bin/Manifest

@@ -1 +1,2 @@
 DIST cytoscape-unix-3.10.3.tar.gz 359982151 BLAKE2B 431a5abbfb736d843cfacc18ccf553f86bb068f18112ec6aa56d85db8910b56885e40f200722bbfcf294199a24d62f79243ea1d6af265684cc69b32505bae55b SHA512 44d26d4910d44c9643b3480d3ec6e0e92606337aab83c56fccc2e40798970a8b3b9861b891c4f9103e1dd37d540ce8cb2f52438d2eeeef3d8b9e63f3620b5da6
+DIST cytoscape-unix-3.10.4.tar.gz 357480347 BLAKE2B 85f25e2a3950bd9c60721b354c0fe6b00aefc9239ec6073c1ae797677f584e9f36501a2b822a2c48e788e649955fa79384984d1cf9c79eb7189cd5124c23cd65 SHA512 36948acca38a465dedc0b2fc6063f1c1a9bdadc6d378970c21fd910ddcfc436ecc246ba685cb958b5d9f7b4505a96533da82783d91500d6fe788cbd01c958a4e

sci-biology/cytoscape-bin/cytoscape-bin-3.10.4.ebuild

@@ -0,0 +1,40 @@
+# Copyright 2024 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI="8"
+
+inherit desktop java-pkg-2
+
+DESCRIPTION="A visualization platform for molecular interaction networks"
+HOMEPAGE="https://www.cytoscape.org/"
+SRC_URI="https://github.com/cytoscape/cytoscape/releases/download/${PV}/cytoscape-unix-${PV}.tar.gz"
+
+S="${WORKDIR}"
+
+LICENSE="LGPL-2.1"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+RDEPEND="virtual/jdk:17"
+
+src_install() {
+	MY_PN="cytoscape"
+	MYW="${WORKDIR}/${MY_PN}-unix-${PV}"
+
+	insinto "/opt/${MY_PN}"
+	doins -r ${MYW}/apps
+	doins -r ${MYW}/framework
+	doins -r ${MYW}/sampleData
+
+	cd ${MYW}
+	sh gen_vmoptions.sh
+	doins Cytoscape.vmoptions
+	exeinto "/opt/${MY_PN}"
+	doexe "${MYW}/${MY_PN}.sh"
+	dosym "${EPREFIX}/opt/${MY_PN}/${MY_PN}.sh" "${EPREFIX}/opt/bin/${MY_PN}"
+
+	exeinto "/opt/${MY_PN}/framework/bin"
+	doexe framework/bin/karaf
+
+	newicon framework/cytoscape_logo_512.png cytoscape_logo.png
+	make_desktop_entry ${MY_PN} CytoScape cytoscape_logo Science
+}